Package MALO is supposed to work under Unix. It is was tested extensively under Linux. You need to download two tar-balls: a) with source code b) with shared data Uncompress them to the same main directory. I. Dependencies: MALO depends on 5 packages, which themselves depend on two more packages. MALO and underlying packages uses "no-underscore" conventions for external names. Unfortunately, some packages by default appends underscores to external names. Therefore, some packages require patches and/or custom installation. You need to re-build the packages in the dependency list even you have it in you system! An attempt to use these packages built by others may result in failure of MALO building process or in a run-time error. You are warned. In order to eliminate a chance of breaking some program at your computer that depend on these packages, it is recommended MALO and its dependencies be installed in a separate directory. Let us assign environment variable PREFIX to that directory. Please append $PREFIX/lib to your LD_LIBRARY_PATH environment variable _before_ starting building MALO and its dependencies. Packages that you need to install: a) petools version 20140404 or newer See http://astrogeo.org/petools for source code and installation instructions. b) spd_client version 20150108 or newer c) fourpack version 20140404 or newer See http://astrogeo.org/fourpack for source code and installation instructions. d) hdf5 Download ftp://ftp.hdfgroup.org/HDF5/current/src/hdf5-1.8.10.tar.bz2 setenv F77 /usr/bin/gfortran setenv FFLAGS "-fbounds-check -fno-underscoring -fPIC" setenv CFLAGS -m64 setenv CXXFLAGS -m64 ./configure --prefix=$PREFIX \ --enable-fortran \ --enable-cxx \ FC=/usr/bin/gfortran \ FCFLAGS="-fbounds-check -fno-underscoring -fPIC" \ CFLAGS="-m64" \ CXXFLAGS="-m64" make -j 12 >& make.log make install >& install.log unsetenv F77 unsetenv FFLAGS unsetenv CFLAGS unsetenv CXXFLAGS e) hdf4 Download ftp://ftp.hdfgroup.org/HDF/HDF_Current/src/hdf-4.2.8.tar.bz2 setenv F77 /usr/bin/gfortran setenv FFLAGS "-fbounds-check -fno-underscoring -fPIC" setenv CFLAGS "-m64 -DHAVE_NETCDF -fPIC" ./configure --prefix=$PREFIX \ --includedir=$PREFIX/include/hdf \ --disable-netcdf \ --enable-fortran \ >& configure.log find ./ -name "Makefile" -exec sed -i "s@LIBS = -ljpeg -lz@LIBS = -ljpeg -lz -lm@g" {} \; make -j 12 >& make.log make >& install.log gcc -shared -shared -Wl,--whole-archive -o $PREFIX/lib/libdf.so $PREFIX/lib/libdf.a -Wl,-no-whole-archive gcc -shared -shared -Wl,--whole-archive -o $PREFIX/lib/libmfhdf.so $PREFIX/lib/libmfhdf.a -Wl,-no-whole-archive unsetenv F77 unsetenv FFLAGS unsetenv CFLAGS f) netcdf-4.2.1 (C) Download ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-4.2.1.tar.gz Download ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-fortran-4.2.tar.gz Download http://astrogeo.org/pet_inc/netcdf_fortran_4.4.patch tar -zxvf $INCOMING/netcdf-4.2.1.tar.gz ./configure --prefix=$PREFIX \ --enable-shared \ --enable-netcdf-4 \ --disable-dap \ --enable-pnetcdf \ --enable-hdf4 \ --disable-dap \ --disable-pnetcdf \ CPPFLAGS="-I$PREFIX/include -I$PREFIX/include/hdf" \ LDFLAGS="-L$PREFIX/lib -lhdf5 -lmfhdf -ldf -ljpeg -lgfortran" \ F77="gfortran" \ FFLAGS="-fbounds-check -fno-underscoring -DNoUnderscoreAppend -fPIC" make -j 1 >& comp.log make install >& install.log make check g) netcdf-4.2.1 (Fortran) tar -zxvf $INCOMING/netcdf-fortran-4.2.tar.gz patch -Np0 -i $INCOMING/netcdf_fortran_4.4.patch ./configure --prefix=$PREFIX \ --enable-shared \ FC=gfortran \ F90=fortran \ CPPFLAGS="-DNDEBUG -DpgiFortran -DNoUnderscoreAppend -I$PREFIX/include/hdf" \ FFLAGS="-m64 -O3 -fPIC -fno-underscoring" \ F90FLAGS="-m64 -O3 -fPIC -fno-underscoring" \ FCFLAGS="-m64 -O3 -fPIC -fno-underscoring" \ LDFLAGS="-L$PREFIX/lib" \ LIBS="-lgfortran" \ CC="gcc" make -j 1 >& comp.log make install >& install.log make check II. Configuration. Keep in mind that directory with shared data is volumuous. You may want to keep these files in a separate sub-directory. Usage: ./configure [OPTION]... [VAR=VALUE]... Defaults for the options are specified in brackets. Configuration: -h, --help display this help and exit -V, --version display version information and exit Installation directories: --prefix=PREFIX install architecture-independent files in PREFIX [$HOME] --share=SHARE install MALO specific data. Since the data are voluminous (over 11 Gb), you may want to install them in a different directory. [$PREFIX/share] --script=PREFIX install additional C-shell and Python programs. You may want to to install them in a separate directory. [$PREFIX/script] Optional Features: --disable-FEATURE do not include FEATURE (same as --enable-FEATURE=no) --enable-FEATURE[=ARG] include FEATURE [ARG=yes] --enable-shared create both shared and static library (default) --disable-shared create only static library Optional Packages: --with-PACKAGE[=ARG] use PACKAGE [ARG=yes] --without-PACKAGE do not use PACKAGE (same as --with-PACKAGE=no) --with-petools=[dir name] specifies directory names where package petools is installed (default $HOME/petools ) --with-fourpack=[dir name] specifies directory names where package fourpack is installed (default: $HOME ) --with-netcdf=[dir name] specifies directory names where package netcdf is installed (default: $HOME/netcdf ) --with-hdf5=[dir name] specifies directory names where package hdf5 is installed (default: $HOME/hdf5 ) Eample: ./configure --prefix=/opt64 \ --with-petools=/opt64 \ --with-fourpack=/opt64 \ --with-netcdf=/opt64 \ --with-hdf5=/opt64 \ --share=/progs/malo_20140214/share \ --script=/progs/malo_20140214/script III. Build make make install Last updated on 2015.02.09_22:01:16